Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MDKQKEQLSVEVARLYYQADLGQQEIATRLGVSRPTVSRLLQNAKTKGYVKIEVQDPFSNLTELAVALKEKYQLKNVTVAFSQTNDYSEITKQISQSAAEYLEEIIHDGDILGVSWGTTMYKIAQKLSPLKA--EIKVVQLKGGVSHS-DVNTYAAETLALFGAAYDTAPVSLPLPVVLDNPLAKQMVEADRHIKNIIELGKKANIAIFTVGTVRDEALLFRLGYFSDQEKARLKEK-AVGDICSRFFTIDGEIADEKMDERTIGINLQELKQKETAILVAGGERKIKAIHGALRGGYANHFITDQFTAKQLLEQNFIN |
| 2W48 Chain:A ((4-315)) | --SDDIRLIVKIAQLYYEQDMTQAQIARELGIYRTTISRLLKRGREQGIVTIAINYDYNENLWLEQQLKQKFGLKEAVVASSE----EEQLSAMGQHGALLVDRLLEPGDIIGFSWGRAVRSLVENLPQRSQSRQVICVPIIGGPSGKLESRYHVNTLTYGAAARLKAESHLADFPALLDNPLIRNGIMQSQHFKTISSYWDSLDVALVGIGSPAIRDGANWHAFYGSEESDDLNARHVAGDICSRFYDINGGLVDTNMSEKTLSIEMAKLRQARYSIGIAMGEEKYSGILGALHGRYINCLVTNRETAELLLK----- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2W48.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -154101 for 2496 contacts (-61.7/contact) +
2D Compatibility (PS) -33373 + (NN) -13353 + (LL) 416
1D Compatibility (HY) -20000 + (ID) 4600
Total energy: -225011.0 ( -90.15 by residue)
QMean score : 0.572
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