Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | LTKTLQDRMILPGNGTIPYIGLGVFQVTE--QEFIAGAVEKAIEVGYRLFDTAAVYNNEAIVGQAI----ASSAVSREELFISSKVWNGDLGYDETLFAFERTLRNLKLDYLDLYLIHWPVAGKYRD--------------------SWRAMERLHDEKLIKSIGVANFKQHHLSDLLV---AANEKPVLNQVETHPLLPQNDLRKYLVEQNIAHAAWSPLA--------KGILMQNPVITEIAKKHQASVDQVILQWHLNRNTIIFPKSITSSRIEENSRLSYFQLDASDMEKIDRLETGKRVGPDPDDLEYFLSSIERERAYLASENEE |
| 4JQ4 Chain:B ((16-304)) | ----------------MPVLGFGTYAPAEVPKSKALEAVKLAIEAGFHHIDSAHVYNNEEQVGLAIRSKIADGSVKREDIFYTSKLWSNSHRPELVRPALERSLKNLQLDYVDLYLIHFPVSVKPGEEVIPKDENGKILFDTVDLCATWEAMEKCKDAGLAKSIGVSNF-NHRLLEMILNKPGLKYKPVCNQVECHPYFNQRKLLDFCKSKDIVLVAYSALGSHPWVDPNSPVLLEDPVLCALAKKHKRTPALIALRYQLQRGVVVLAKSYNEQRIRQNVQVFEFQLTSEEMKAIDGLNRNVR---------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4JQ4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -133114 for 2047 contacts (-65.0/contact) +
2D Compatibility (PS) -26357 + (NN) -8825 + (LL) 2312
1D Compatibility (HY) -22800 + (ID) 5000
Total energy: -193784.0 ( -94.67 by residue)
QMean score : 0.382
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