Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKSALELKNVSFSRKRDFE-MKNVSASIPEGKITTLIGPNGSGKSTMLRLMMRLLTPDSGEILLNEKNITEIPSKDLAKKMTMLSQAPEGLVDVMVHDLVAYGRLPHRSWLSTLQEEDEAVIHWAIKVCNLEELAYRPLHSLSGGERQRAWLAMALAQKTPILLLDEPTTYLDIAHQLELLDLLVHLNKEYNLTIVLVLHDLNQAAIYSDHVFVCENGQLVKDGSPREVF-------TTELLRDVFHITADITEKDGKQHIHPLASTRFEY-------------------------------------------------------------------------------- |
| 1Z47 Chain:A ((11-355)) | GSMTIEFVGVEKIYPGGARSVRGVSFQIREGEMVGLLGPSGSGKTTILRLIAGLERPTKGDVWIGGKRVTDLPPQK--RNVGLVFQNYALFQHMTVYDNVSFGLREKR----VPKDEMDARVRELLRFMRLESYANRFPHELSGGQQQRVALARALAPRPQVLLFDEPFAAIDTQIRRELRTFVRQVHDEMGVTSVFVTHDQEEALEVADRVLVLHEGNVEQFGTPEEVYEKPGTLFVASFIGESNVWTRAVQNGRIEVAGAALPVDPAVSEGSEVAVVVRPKDVELQPASEREAHAQVVRSAFKGSYSACWIRTKDGEVWEVHVPSADRHRWSPGAWVHMNVTRWFIFPR |
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General information:
TITO was launched using:
| RESULT:
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Template: 1Z47.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -144390 for 1993 contacts (-72.4/contact) +
2D Compatibility (PS) -27745 + (NN) -11720 + (LL) 596
1D Compatibility (HY) -12800 + (ID) 3650
Total energy: -199709.0 ( -100.21 by residue)
QMean score : 0.445
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