Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSNTKFPDGFMWGGATAANQFEGGYNLGGKGLACADLFTGGTHTEPRRITAQLEESTFYPSHEAVDFYHHYKEDIKLMAEAGFKVFRMSINWTRIFPTGKEAEPNEEGLQFYEDVFNELKKHQIEPLVTIAHFDIPLALTNEVNGWASRDLIDYYLHFCEVIFKRYKHLVKHWLTFNEINTATMEIGNYLSLGIRHAEGDFLHQKDDPKVRYQALHHQFVASAKAVKLGHSINPDFMIGCMIAYMPRYPRTCEPSDVLLAKQTEAMHSH--FCGDVHVKGYYPFYAKTFFKDNGIELEFDPE---DEQILREGTVDFYTFSYYLTLCASNDPAYKNSGKSVIGGAENPYLKTNDWGMQTDPVGLRIALNDLYTRYNIP-LMVVENGLGAFDKLEDDGTINDPYRIDYFKEHILQMHKAIQDGVDLIGFTIWGCIDLVSASTGEMAKRYGIIYVDKYDDGTGDYSRKK---KASYYWYKDVISSNGEIGLEE |
1OIN Chain:A ((27-465)) | ----KFPEGFLWGVATASYQIEGSPLADGAGMSIWHTFSHTPGNVKNGDTGDV----------ACDHYNRWKEDIEIIEKLGVKAYRFSISWPRILPEGT-GRVNQKGLDFYNRIIDTLLEKGITPFVTIYHWDLPFALQLK-GGWANREIADWFAEYSRVLFENFGDRVKNWITLNEPWVVAI-VGHLYGV---HAPG-----MRDIYVAFRAVHNLLRAHARAVKVFRETVKDGKIGIVFNNGYFEPASEKEEDIRAVRFMHQFNNYPLFLNPIY-RGDYPELVLEFAR------EYLPENYKDDMSEIQEKIDFVGLNYYSGHLVKFDP------PAKVSFVERDLPKTAM-GWEIVPEGIYWILKKVKEEYNPPEVYITENGAAFDDVVSEDGRVHDQNRIDYLKAHIGQAWKAIQEGVPLKGYFVWSLLDNFEWAEG-YSKRFGIVYV--------DYSTQKRIVKDSGYWYSNVVKNNG------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 1OIN.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -248534 for 3780 contacts (-65.7/contact) +
2D Compatibility (PS) -45205 + (NN) -17728 + (LL) 2300
1D Compatibility (HY) -30400 + (ID) 7500
Total energy: -347067.0 ( -91.82 by residue)
QMean score : 0.530
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