Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSKVRLYIARHGKTMFNTIGRAQGWSDTPLTTFGELGIKELGLGLKASNISFKEAFSSDSGRTLQTMEIILREVQQENIPYTRDKRIREWCFGSLDGGYDGDLFNGVL--------PRVSNGDMSHLTHEEIANLICQVDTAGWAEPWAILSNRILSGFTAIAKKIEDIGGGNAIVVSHGMTIATFLWLIDHSTPRSLGIDNGSVSVVDFEDGTFSIQSIGD-MSYREKGREILEKTLQ
3R7A Chain:A ((11-233))
SNVVTLYVTRHGKTILNTNHRAQGWADSPLVEKGVEVATNLGTGL--KDIHFMNAYSSDSGRAIETANLVLKYSEQSKLKLEQRKKLRELNFGIFEGEKLDNMW-DAVGKAAGVTSPEELLKFSIQE----VIDLIRAADPTKQAEDWELFSTRIKAEIDKISEEAAKDGGGNVLVVVHGLLITTLIEMLDSSK-TKLGVENASVTKIVYQDGIYTVESVGDMSYVAKGKE--------
General information:
TITO was launched using:
RESULT:
Template:
3R7A.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -106822 for 1838 contacts (-58.1/contact) +
2D Compatibility (PS) -22511 + (NN) -7174 + (LL) 1292
1D Compatibility (HY) -12000 + (ID) 3700
Total energy: -150915.0 ( -82.11 by residue)
QMean score : 0.434
(partial model without unconserved sides chains):
PDB file :
Tito_3R7A.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3R7A-query.scw
PDB file :
Tito_Scwrl_3R7A.pdb
: