Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKIGQYDIT-GKACIMGILNVTPDSFSDGGSYTTIDSALNQVGEMLEQGVAIVDIGGESTRPGAVFVTAEEEIKRVVPMIKAIREVYPDLLLSIDTYKTEVAQAALDAGVHILNDVWSGLYDGKMLSLAAERNVPIILMH--------NQEEAVYQDIKKEVCEFLLERAERALEAGVSKDNIWIDPGFGFAKT-EEQNLELLKGLEQVCDL-----GYPVLFGISRKRTVNYLLGGNREVTERDMGTAALSAWAIAKGCQIVRVHNVEVNKDIVTVISQLV
2Y5S Chain:A ((11-283))LQCGRFELTFERPLVMGILNATP----------ARDDALRRAERMIAEGADLLDIGGESTRPGAPPVPLDEELARVIPLVEALRPL--NVPLSIDTYKPAVMRAALAAGADLINDIW-GFRQPGAIDAVRDGNSGLCAMHMLGEPQTMQVGEPDYGDVVTDVRDFLAARAQALRDAGVAAERICVDPGFGFGKAVVDDNYALLAALPDTAPARPDGRAYPILAGMSRKSMLGAVIGGKPPL-ERVAASVAAALCAVERGAAIVRVHDVAATVDALSVWNAVR


General information:
TITO was launched using:
RESULT:

Template: 2Y5S.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -200733 for 2157 contacts (-93.1/contact) +
2D Compatibility (PS) -27393 + (NN) -13978 + (LL) -328
1D Compatibility (HY) -16800 + (ID) 4900
Total energy: -264132.0 ( -122.45 by residue)
QMean score : 0.559

(partial model without unconserved sides chains):
PDB file : Tito_2Y5S.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2Y5S-query.scw
PDB file : Tito_Scwrl_2Y5S.pdb: