Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSKTYHFIGIKGSGMSALALMLHQMGHNVQGSDVDKYYFTQRGLEQAGVTILPFSPNNISEDLEIIAGNAFRPDNNEELAYVIEKGYHFKRYHEFLGDFMRQFTSLGVAGAHGKTSTTGLLAHVLKNITD-TSFLIG--DGT---------G----------------------R---------G-----SANANYFVFEADEYER-H-FMPYHPEYSIITNIDFDHPDYFT-GLEDVFNAFNDYAKQVQKGLFIYGED-SK-LHEITSK--API------YYYGFEDSNDFIAKDITRTVNGSDFKVFYNQEEIGQFHVPAYGKHNILNATAVIANLYI--MGIDMALVAEHLKTFSGVKRRFTEKIIDDTVIIDDFAHHPTEIIATLDAARQKYPSKEIVAIFQPHTFTRTIALLDDFAHALS-QADSVYLAQIYGS-AREVDNGEVKVEDLAAKIVKHSDLVTVENVSPLLNHDNAVYVFMGAGDIQLYERSFEELLANLTKNTQ |
| 3NRS Chain:A ((50-429)) | ----------------------------------------------------------------------------------------------------PAPKIFTVAGTNGKGTTCCTLEAILLAAGLRVGVYSSPHLLRYTERVRIQGQELSEAEHSHSFAQIEAGRGDISLTYFEFGTLSALQLFKQAKLDVVILEVGLGGRLDATNIVDSDVAAITSIALDHTDWLGYDRESIGREKAGVFRGG-KPAVVGEPDMPQSIADVAAELGAQLYRRDVAWKFSQ---------------NGWHWQCG----ERQLTGLPVPN-VPLANAATALAVLHYSELPLSDEAIRQGLQAA-SLPGRFQVVSE-QPLLILDVAHNPHAARYLVNRLAQVI--GKVRAVVGMLSDK----DIAGTLACLSERVDEWYCAPLEGPRGASA---GQLAEHLV-SARQFSDVETAWRQAMQDADTQDVVIVCGSFHTVAHVMAALHL--------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3NRS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -159675 for 2504 contacts (-63.8/contact) +
2D Compatibility (PS) -31315 + (NN) -11823 + (LL) 8356
1D Compatibility (HY) -6000 + (ID) 2600
Total energy: -203057.0 ( -81.09 by residue)
QMean score : 0.432
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