Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMAVLILGGAGYIGSHMVDQLITQGKEKVIVVDNLVTG------HR---QAVH----SDAIFYEGDLSDKTFMRQVFRENPDVDAVIHFAAFSLVAESMENPLKYFDNNTAGMIKLLEVMNECDIKNIVFSSTAATYGIPEQVPILETAPQN-PINPYGESKLMMETIMKWADQA-YGIKFVALRYFNVAGDKPDGSIGEDHK-PETHLLPIILQVAQGVRDKIMIFGDDYNTPDGTNVRDYVHPFDLADAHILAVDYLRQGNESNVFNLGSSTGFSNLQMLEAARRITGKEIPAQKAARRPGDPDTLIASSEKARQILGWEPKFDNIDKIISSAWAWHSSHPNGYED
1EK6 Chain:A ((3-345))EKVLVTGGAGYIGSHTVLELLEAG-YLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEFEEMDILDQGALQRLFKKY-SFMAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMKAHGVKNLVFSSSATVYGNPQYLPLDEAHPTGGCTNPYGKSKFFIEEMIRDLCQADKTWNAVLLRYFNPTGAHASGCIGEDPQGIPNNLMPYVSQVAIGRREALNVFGNDYDTEDGTGVRDYIHVVDLAKGHIAALRKLKEQCGCRIYNLGTGTGYSVLQMVQAMEKASGKKIPYKVVARREGDVAACYANPSLAQEELGWTAAL-GLDRMCEDLWRWQKQNPSGFGT


General information:
TITO was launched using:
RESULT:

Template: 1EK6.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -161440 for 2922 contacts (-55.2/contact) +
2D Compatibility (PS) -36094 + (NN) -23793 + (LL) -152
1D Compatibility (HY) -25200 + (ID) 6600
Total energy: -253279.0 ( -86.68 by residue)
QMean score : 0.568

(partial model without unconserved sides chains):
PDB file : Tito_1EK6.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1EK6-query.scw
PDB file : Tito_Scwrl_1EK6.pdb: