Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMQMNRYDQAATLRAKMEKRERVLPMVYSQKAKTLAVISGKGGVGKSNITLNMALAL-QDKGKKVLLIDLDIGMGNID-ILIGNSSSATIIDVLTDRK----PLLQS-LSVGPKGLRYISGGTGLDVMFQLDQRKWTFFANELSHALSQFDYVLFDMGAGLSKDQLPFILSAEDILIITTPEPTAIMDAYSAVKHLVLTENKLS-MKVAVNRCRDQKEGLDAFARLSRTIHMFLDVQVQFAGSVSDDVIV-SKAVVEQVPFFIKSPQAKASRSVRILADALFEREETRHKEDKQTFIEKLSSFLMRRA
3EA0 Chain:A ((3-242))-----------------------------AKRVFGFVSAKGGDGGSCIAANFAFALSQEPDIHVLAVDISLPFGDLDMYLSGNTHSQDLADISNASDRLDKSLLDTMVQHISPSLDLIPSPATFEKIVNIEPERVSDLIHIAASF---YDYIIVDFGASIDHVGVWVLEHLDELCIVTTPSLQSLRRAGQLLKLCKEFEKPISRIEIILNR--ADTNSRITSDEIEKVIG------RPISKRIPQDEDAMQESLLSGQSVLKVAPKSQLSKTIVDWALHL---------------------------


General information:
TITO was launched using:
RESULT:

Template: 3EA0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1254 -161773 -129.01 -700.31
target 2D structure prediction score : 0.52
Monomeric hydrophicity matching model chain A : 0.72

3D Compatibility (PKB) : -129.01
2D Compatibility (Sec. Struct. Predict.) : 0.52
1D Compatibility (Hydrophobicity) : 0.72
QMean score : 0.448

(partial model without unconserved sides chains):
PDB file : Tito_3EA0.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3EA0-query.scw
PDB file : Tito_Scwrl_3EA0.pdb: