Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMNPKYKPLFEPFTFKSGVTINNRIAVAPMTHYASN-EDGTISEAELDYIIPRS-KEMGMVITACANVTPDGKAFPGQPAIHDDSNIPGLKKLAQAIQAQGAKAVVQIHHGGIECPSELVPQQDVVGPSDVFDN-GKQIARALTEEEVENIVKAFGEATRRAIEAGFDGVEIHGANGYLIQQFYSPKTNQRTDRWGGSDEKRLAFPLAIVDEVKKAASEHAKGAFLVGYRLSPEEPETPGLTMTETYTLVDALGDKELDYLHISLMDVNSKA-RRGADPTRTRMDLLNERVGNKVPLIAVGSIHSADDALAVIENG-IPLVAMGREILVDPNWTVKVKEGREKQIETVIKGTDKEKYHLPEPLWQAIVNTQGWVPYKD
3GR7 Chain:A ((1-329))---MNTMLFSPYTIR-GLTLKNRIVMSPMCMYSCDTKDGAVRTWHKIHYPARAVGQVGLIIVEATGVTPQGRISERDLGIWSDDHIAGLRELVGLVKEHGAAIGIQLAHAGRKSQVPG----EIIAPSAVPFDDSSPTPKEMTKADIEETVQAFQNGARRAKEAGFDVIEIHAAHGYLINEFLSPLSNRRQDEYGGSPENRYRFLGEVIDAVREVW------DGPLFVRISASDYHPDGLTAKDYVPYAKRMKEQGVDLVDVSSGAIVPARMNVYPGYQVPFAELIRREA--DIPTGAVGLITSGWQAEEILQNGRADLVFLGRELLRNPYWPYAAARELGAKIS--------------------------------


General information:
TITO was launched using:
RESULT:

Template: 3GR7.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 2028 25944 12.79 80.07
target 2D structure prediction score : 0.66
Monomeric hydrophicity matching model chain A : 0.77

3D Compatibility (PKB) : 12.79
2D Compatibility (Sec. Struct. Predict.) : 0.66
1D Compatibility (Hydrophobicity) : 0.77
QMean score : 0.638

(partial model without unconserved sides chains):
PDB file : Tito_3GR7.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3GR7-query.scw
PDB file : Tito_Scwrl_3GR7.pdb: