Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)


Input alignment information:
Query sequenceMHILVVGVDYKSAPIEIREKVSFQPNELAEAMVQLKEEKSILENIIVSTCNRTEIYAVVDQLHTGRYYIKKFLADWFQLSKEELSPFLTFYESDAAVEHLFRVACGLDSMVIGETQILGQVRDSFKTAQQEKTIGTIFNELFKQAVTVGKRTHAETDIGSNAVSVSYAAVELAKKIFGNL-------SSKHILILGAGKMGELAAENLHGQGIGKVTVINRTYLKAKELADRFSGEARSL----NQLESALAEADILISST----GASEFVVSKEMMENANKLRKGRPLFMVDIAV----------PRDLDPALNDLEGVFLYDIDDLEGIVEANMKERRETAEKVELLIEETIVEFKQWMNTLGVVPVISALREKALAIQSETMDSIERKLPHLSTREKKLLNKHTKSIINQMLRDPILKVKELAADADSEEKLALFMQIFDIEEAAGRQMMKTVESSQKVHSFKKAESKAGFSPLVSE
1PJC Chain:A ((136-303))-------------------------------------------------------------------------------------------------------------------------------------------------------------AGRLSVQFGARFLERQQGGRGVLLGGVPGVKPGKVVILGGGVVGTEAAKMAVGLGA-QVQIFDINVERLSYLETLFGSRVELLYSNSAEIETAVAEADLLIGAVLVPGRRAPILVPASLV---EQMRTGS--VIVDVAVDQGGCVETLHPTSHTQPTYEVFGVVHYGVPNMPGA-----------------------------------------------------------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 1PJC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output 		Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 752 -12446 -16.55 -87.03
target 2D structure prediction score : 0.64
Monomeric hydrophicity matching model chain A : 0.58

3D Compatibility (PKB) : -16.55
2D Compatibility (Sec. Struct. Predict.) : 0.64
1D Compatibility (Hydrophobicity) : 0.58
QMean score : 0.651

(partial model without unconserved sides chains):
PDB file : Tito_1PJC.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1PJC-query.scw
PDB file : Tito_Scwrl_1PJC.pdb: