Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSDLVRVERKGRVTTVILNRPASRNAVNGPTAAALCAAFEQFDRDDAASVAVLWGAGGTFCAGADLKAFGTPEANSVHRTGPGPMGPSRMMLSKPVIAAVSGYAVAGGLELALWCDLRVAEEDAVFGVFCRRWGVPLIDGGTVRLPRLIGHSRAMDMILTGRGVPADEALAMGLANRVVPKGQARQAAEELAAQLAALPQQCLRSDRLSALHQWGLPESAALDLEFASIARVAGEALEGARRFAAGAGRHGAPAPRAEQGDTL
3PE8 Chain:A ((8-211))
-SPVLLVDTTDRVRTLTLNRPQSRNALSAELRSTFFRALSDAQNDDDVDVVIVTGADPVFCAGLDLKEL-------------SPKWPD---MTKPVIGAINGAAVTGGLELALYCDILIASENAKFADTHARVGLMPTWGLSVRLPQKVGVGLARRMSLTGDYLSAQDALRAGLVTEVVAHDDLLTAARRVAASIVGNNQKAVRA-LLDSYHR--------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
3PE8.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -130709 for 1644 contacts (-79.5/contact) +
2D Compatibility (PS) -21877 + (NN) -11176 + (LL) 3576
1D Compatibility (HY) -12000 + (ID) 3850
Total energy: -176036.0 ( -107.08 by residue)
QMean score : 0.541
(partial model without unconserved sides chains):
PDB file :
Tito_3PE8.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3PE8-query.scw
PDB file :
Tito_Scwrl_3PE8.pdb
: