Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRVLLLGPPGAGKGTQAVKLAEKLGIPQISTGELFRRNIEEGTKLGVEAKRYLDAGDLVPSDLTNELVDDRLNNPDAANGFILDGYPRSVEQAKALHEMLERRGTDIDAVLEFRVSEEVLLERLKGR-------------------------------GRADDTDDVILNRMKVYRDETAPLLEYYRDQLKTVDAVGTMD--EVFARALRALGK
2ORI Chain:B ((1-213))
MNLVLMGLPGAGKGTQGERIVEDYGIPHISTGDMFRAAMKEETPLGLEAKSYIDKGELVPDEVTIGIVKERLGKDDCERGFLLDGFPRTVAQAEALEEILEEYGKPIDYVINIEVDKDVLMERLTGRRICSVCGTTYHLVFNPPKTPGICDKDGGELYQRADDNEETVSKRLEVNMKQTQPLLDFYSEKGYLVNVNGQRDIQDVYADVKDLLG-
General information:
TITO was launched using:
RESULT:
Template:
2ORI.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -51191 for 1411 contacts (-36.3/contact) +
2D Compatibility (PS) -19995 + (NN) -15743 + (LL) 64
1D Compatibility (HY) -16800 + (ID) 4200
Total energy: -107865.0 ( -76.45 by residue)
QMean score : 0.619
(partial model without unconserved sides chains):
PDB file :
Tito_2ORI.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2ORI-query.scw
PDB file :
Tito_Scwrl_2ORI.pdb
: