Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ----------------------MGEGSRRPSGMLMSVDLEPVQLVGPDGTPTAERRYHRDLPEETLRWLYEMMVVTRELDTEFVNLQRQGELALYTPCRGQEAAQVGAAACLRKTDWLFPQYRELGVYLVRGIPPGHVGVAWRGTWHGG---------LQFTTKCCAPMSVPIGTQTLHAVGAAMAAQRLDEDSVTVAFLGDGATSEGDVHEALNFAAVFTTPCVFYVQNNQWAISMPVSRQTAAPSIAHKAIGYGMPGIRVDGNDVLACYAVMAEAAARARAGDGPTLIEAVTYRLGPHTTADDPTRYRSQEEVDRWATLDPIPRYRTYLQDQGLWSQRLEEQVTARAKHVRSELRDAVFDAPDF--DVDEVFTTVYAEITPGLQAQREQLRAELARTD---------- |
| 1DTW Chain:A ((7-400)) | PQFPGASAEFIDKLEFIQPNVI--------------SGIPIYRVMDRQGQII-NPSEDPHLPKEKVLKLYKSMTLLNTMDRILYESQRQGRISFYMTNYGEEGTHVGSAAALDNTDLVFGQYREAGVLMYRDYPLELFMAQCYGNISDLGKGRQMPVHYGCKERHFVTISSPLATQIPQAVGAAYAAKRANANRVVICYFGEGAASEGDAHAGFNFAATLECPIIFFCRNNGYAISTPTSEQYRGDGIAARGPGYGIMSIRVDGNDVFAVYNATKEARRRAVAENQPFLIEAMTYRIGHHSTSDDSSAYR-----------HPISRLRHYLLSQGWWDEEQEKAWRKQSRRKVMEAFEQAERKP--KPNPNLLFSDVYQEMPAQLRKQQESLARHLQTYGEHYPLDHFDK |
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General information:
TITO was launched using:
| RESULT:
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Template: 1DTW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -168008 for 2867 contacts (-58.6/contact) +
2D Compatibility (PS) -37334 + (NN) -22288 + (LL) 1608
1D Compatibility (HY) -21600 + (ID) 6150
Total energy: -253772.0 ( -88.51 by residue)
QMean score : 0.439
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