Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLIRWHIQLGNIVIPKSVNPMRIASNFDAFDFPRSMTEPGLVRIRKPSISQAGEMT
4NKC Chain:A ((247-281))
VLIRFPMQRNLVVIPKSVTPERIAENFKVFDFELS---------------------
General information:
TITO was launched using:
RESULT:
Template:
4NKC.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -7902 for 160 contacts (-49.4/contact) +
2D Compatibility (PS) -3778 + (NN) -1043 + (LL) 1352
1D Compatibility (HY) -4400 + (ID) 1000
Total energy: -16771.0 ( -104.82 by residue)
QMean score : 0.164
(partial model without unconserved sides chains):
PDB file :
Tito_4NKC.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4NKC-query.scw
PDB file :
Tito_Scwrl_4NKC.pdb
: