Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MGGVLTLDAAFLGSVPADLGKALLERARADCGPVLHRAIESMREPLATMAGYHLGWWNADRSTAAGSSGKYFRAALVYAAAAACGGDVGDATPVSAAVELVHNFTLLHDDVMDGDATRRGRPTVWSVWGVGVAILLGDALHATAVRILTGLTDECVAVRAIRRLQMSCLDLCIGQFEDCLLEGQPEVTVDDYLRMAAGKTAALTGCCCALGALVANADDATIAALERFGHELGLAFQCVDDLIGIWGDPGVTGKPVGNDLARRKATLPVVAALNSRSEAATELAALYQAPAAMTASDVERATALVKVAGGGHVAQRCADERIQAAIAALPDAVRSPDLIALSQLICRREC- |
| 3OYR Chain:A ((20-343)) | ------------KSGSVDRLVRLAEADMAGVNRLITDRMQSDVAIIPALAEHLIA-----------AGGKRLRPLMTVAAARLAGADNDHFQKLAAAVEFIHTATLLHDDVVVAAH---------LIWGGAQSVLVGDFLFARAFELMVETNS----MKALEILARASRVIAEGEVLQLMRSHDLNLSQAVYLEIIQAKTAELFAAASEAGAVSAGVDVAKSEALRDYGLNLGLAFQLADDALD-------------------YATLPLLLAIARSGPREAEFWERAIGTE----ADFRRARELIIGSGALDATLDLAADYADKAKAALAMFPANDWREALEELADFAVSR |
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General information:
TITO was launched using:
| RESULT:
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Template: 3OYR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -197728 for 2454 contacts (-80.6/contact) +
2D Compatibility (PS) -31726 + (NN) -20589 + (LL) 3184
1D Compatibility (HY) -8000 + (ID) 3950
Total energy: -258809.0 ( -105.46 by residue)
QMean score : 0.457
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