Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRGTDEKYGLPPQPDSDRMTRRTLPVLGLAHELITPTLRQMADR---LDPHMRPVVSYHLGWSDERGRPVNNNCGKAIRPALVFVAAEAAGADPHSAIPGAVSVELVHNFSLVHDDL--MDRDEHRRHRPTVWALWGDAMALLAGDAMLSLAHEVLLDCDSPH-----VGAALRAISE--ATRELIRGQAADTAFESRTDVALDECLKMAEGKTAALMAASAEVGALLAGAPR-SVREALVAYGRHIGLAFQLVDDLLGIWGRPEITGKPVYSDLRSRKKTLPVTWTVAHGGSAGRRLAAWLVDETGSQTASDDELAAVAELIECGGGRRWASAEARRHVTQGIDMVARIGIPDRPAAELQDLAHYIVDRQA |
| 1RQJ Chain:A ((3-298)) | ----------------------FPQQLEACVKQANQALSRFIAPLPFQNTPVVETMQYG-----------ALLGGKRLRPFLVYATGHMFGVSTNTLDAPAAAVECIHAYSLIHDDLPAMDDDDLRRGLPTCHVKFGEANAILAGDALQTLAFSILSDADMPEVSDRDRISMISELASASGIAGMCGGQALDLDAEGK-HVPLDALERIHRHKTGALIRAAVRLGALSAGDKGRRALPVLDKYAESIGLAFQVQDDILDVVGDTATLGKRQGADQQLGKSTYPALLGLEQARK-----------------------------------------KARDLIDDARQSLKQLAEQSLDTSALEALADYIIQRN- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1RQJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -131318 for 2490 contacts (-52.7/contact) +
2D Compatibility (PS) -30643 + (NN) -21591 + (LL) 3716
1D Compatibility (HY) -10800 + (ID) 4250
Total energy: -194886.0 ( -78.27 by residue)
QMean score : 0.385
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