Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTRVVLSVGSNLGDRLARLRSVADGLGD----ALIAASPIYEADPWGGVEQGQFLNAVLIADDPTCEPREWLRRAQEFERAAGRVRGQRWGPRNLDVDLIACYQTSATEALVEVTARENHLTLPHPLAHLRAFVLIPWIAVDPTAQLTVAGCPRPVTRLLAELEPADRDSVRLFRPSFDLNSRHPVSRAPES
4CWB Chain:A ((4-159))
MIQAYLGLGSNIGDRESQLNDAIKILNEYDGISVSNISPIYETAPVGYTEQPNFLNLCVEIQ-TTLTVLQLLECCLKTEECLHRIRKERWGPRTLDVDILLY---------GEEMIDLPKLSVPHPRMNERAFVLIPLNDIAANVVEP--RSKLKVKDLVFVDDSVKR------------------------
General information:
TITO was launched using:
RESULT:
Template:
4CWB.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -94828 for 1194 contacts (-79.4/contact) +
2D Compatibility (PS) -16081 + (NN) -5928 + (LL) 2016
1D Compatibility (HY) -8400 + (ID) 2550
Total energy: -125771.0 ( -105.34 by residue)
QMean score : 0.441
(partial model without unconserved sides chains):
PDB file :
Tito_4CWB.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4CWB-query.scw
PDB file :
Tito_Scwrl_4CWB.pdb
: