Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTPALVVGPAAWHAVHVTQSSSAITPGQTAELYPGDIKSVLLTAEQIQARIAELGEQIGNDYRELSATTGQD-LLLITVLKGAVLFVTDLARAI---PVPTQFEFMAVSSYGSSTSSSGVVRILKDLDRDIHGRDVLIVEDVVDSGLTLSWLSRNLTSRNPRSLRVCTLLRKPDAVHANVEIAYVGFDIPNDFVVGYGLDYDERYRDLSYIGTLDPRVYQ
1I0L Chain:A ((9-190))
-------------------------------------EKILFTEEEIRTRIKEVAKRIADDYKGKGLRPYVNPLVLISVLKGSFMFTADLCRALCDFNVPVRMEFICVSSYGEGLTSSGQVRMLLDTRHSIEGHHVLIVEDIVNTALTLNYLYHMYFTRRPASLKTVVLLDKREGRRVPFSADYVVANIPNAFVIGYGLDYDDTYRELRDIVVLRPEVY-
General information:
TITO was launched using:
RESULT:
Template:
1I0L.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -158810 for 1349 contacts (-117.7/contact) +
2D Compatibility (PS) -19312 + (NN) -6084 + (LL) 2372
1D Compatibility (HY) -20400 + (ID) 4000
Total energy: -206234.0 ( -152.88 by residue)
QMean score : 0.662
(partial model without unconserved sides chains):
PDB file :
Tito_1I0L.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1I0L-query.scw
PDB file :
Tito_Scwrl_1I0L.pdb
: