Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MDRYCVFGNPIGHSKSPLIHRLFAEQTGE----ALVYDAQLAPLDD-FPGFARRFFEQGKGANVTVPFKEEAYRLVDELSERATRAGAVNTLIRLADGRLRGDNTDGAGLLRDLTANAGVELRGKRVLLLGAGGAVRGVLEPFLGECPAELLIANRTARKAVDLAERFADLGAVHGCGFAEVEGPFDLIVNGTSASLAGDVPPLAQ----SVIEPGRTVCYDMMYAKEPTAFNRWAAERGAARTLDGLGMLVEQAAEAFFLWRGVRPASAPVLETLRRQLATV |
| 3PHH Chain:A ((3-261)) | LKSFGVFGNPIKHSKSPLIHNACFLTFQKELRFLGHYHPILLPLESHIKSEFLH--LGLSGANVTLPFKERAFQVCDKIKGIALECGAVNTLVLE-NDELVGYNTDALGFYLSL-K-------YQNALILGAGGSAKALACELKKQGL-QVSVLNRSSRGLDF-FQRLGCD---CFM--EPPKSAFDLIINATSASLHNEL-PLNKEVLKGYFKE-GKLAYDLAYGFL-TPFLSLAKELKT-PFQDGKDMLIYQAALSFEKFSASQIPYSKAFEVMRSVF--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3PHH.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -105686 for 2198 contacts (-48.1/contact) +
2D Compatibility (PS) -25836 + (NN) -5921 + (LL) 1500
1D Compatibility (HY) -13600 + (ID) 4100
Total energy: -153643.0 ( -69.90 by residue)
QMean score : 0.450
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