Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNRVLYPGTFDPITKGHGDLIERASRLFDHVIIAVAASPKKNPLFSLEQRVALAQEVTKHLPNVEVVGFSTLLAHFVKEQKANVFLRGLRAVSDFEYEFQLANMNRQLAPDVESMFLTPSEKYSFISSTLVREIAALGGDIS----KFVHPAVADALAERFKR
3OTW Chain:C ((12-162))
----IYPGTFDPVTNGHIDIIHRSSELFEKLIVAVAHSSAKNPMFSLDERLKMIQLATKSFKNVECVAFEGLLANLAKEYHCKVLVRGLRVVSDFEYELQMGYANKSLNHELETLYFMPTLQNAFISSSIVRSIIAHKGDASHLVPKEIYPLISK--------
General information:
TITO was launched using:
RESULT:
Template:
3OTW.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -105698 for 1102 contacts (-95.9/contact) +
2D Compatibility (PS) -16044 + (NN) -9390 + (LL) 1384
1D Compatibility (HY) -15600 + (ID) 3550
Total energy: -148898.0 ( -135.12 by residue)
QMean score : 0.540
(partial model without unconserved sides chains):
PDB file :
Tito_3OTW.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3OTW-query.scw
PDB file :
Tito_Scwrl_3OTW.pdb
: