Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSKNARYAWRLSLGGLLLGLLACAVYLLAVPLGFKYGEIQVGHGLEHEGRIAWDAAGVPHIRAQSLEDGYFLLGYSHARDRLWQMEFARRYAGGTLSEVFGAKTLPMDRFARTLGFRRTAEGIYANLDAPTRVLLQRYSDGINAYLELAPAALPLEFSLVRHERPGPWGPVDSLSLHLLYSWTLSANLGMQLQRLALAEHLDLARINEVFAPYPGERPPATRDYASLYRSLHGTPDAGKLLGQLPGSNVEGIGSNNWVVSASRSATGKPLLANDPHLRLTNPAAFYLASLKIPGLSLTGANFAGAPLFVIGHNQRIAWGYTNTGSHIQDAYLERVDPQDPRRYLTPDGYRPFETRLERIAVRDGETVSLEVRSTRHGPVISDIYEPARLPQAQRDRLVIALAWTGLDRHDKTFPSLLAINRAEGWEQFLDAAANFGVPPQNMVYADVEGNIGYVSAGRVPLRGADDDLHGLAPSPGWESRYDWVGYVPESAKPRSLNPREGFIATANQRIVPPDNAFD--FGHDWVLPYRYDRIREWLGGPGQRTLEDSLEL--QNDEFSSVMASLLPKMLEQVSDP--ELRASEAFALLQGWNHQAAA-------DLAAPLIAGYWVRAFTRELLQPRIGTQLLAS------------GWNQRNYDGFL-RLI---LDGQADLRFW---CGQ--EQGCDLKLNQSLRRALDELRAAHGSAPSGWKWGEAHAALAEHVPFHKTPLRALFDLKNNKGGDNFSVNVGRFDYSDPANPFNTRIAATLRMVIDLADFDNSRYALSTRNSGLP-----FD-GATDLNELWARGAYIRIADDAPDA---TDRQLVLRPSASSSGEPRP |
| 1GK9 Chain:B ((1-554)) | -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SNMWVIGKSKAQDAKAIMVNGPQFGWYAPAYTYGIGLHGAGYDVTGNTPFAYPGLVFGHNGVISWGSTAGFGDDVDIFAERLSAEKPGYYLHNGKWVKMLSREETITVKNGQAETFTVWRTVHGNILQTDQTT-------QTAYAKSRAWDGKEV--ASLLAWTHQMKAKNWQEWTQQAA-KQALTINWYYADVNGNIGYVHTGAYPDRQSGH--DPRLPVPGT-GKWDWKGLLPFEMNPKVYNPQSGYIANWNNSPQK-DYPASDLFAFLWGGADRVTEIDRLLEQKPRLTADQAWDVIRQTSRQDLNLRLFLPTLQAATSGLTQSDPRRQLVETLTRWDGINLLNDDGKTWQQPGSAILNVWLTSMLKRTVVAAVPMPFDKWYSASGYETTQDGPTGSLNI-SVGAKILYEAVQ-G-DKSPIPQAVDLFAGKPQQEVVLAALEDTWETLSKRYGNNVSNWKTPAMALTFRANNFFGV-----------PQAAAEETRHQAEYQNR-GTENDMIVFSPTTS-----DRPVLAWDVVAPGQSGFIAPDGTVDKHYEDQLKMYENFGRKSLWLTKQDVEAHKESQEVLHVQR-------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1GK9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -110090 for 4029 contacts (-27.3/contact) +
2D Compatibility (PS) -55128 + (NN) -28155 + (LL) 17568
1D Compatibility (HY) -13600 + (ID) 5350
Total energy: -194755.0 ( -48.34 by residue)
QMean score : 0.330
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