Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSNKNNLRYALGALALSVSAASLAAPSEAQQFTEFWTPGKPNPSICKSPLLVSTPLGLPRCLQASNVVKRLQKLEDIASLNDGNRAAATPGYQASVDYVKQTLQKAGY-KVSVQPFPFTAYYPKGPGSLSATVPQP--VTYEWEKDFTYLSQTEAGDVTAKVVPVDLSLGAGNTSTSGCEAEDFANFPAGSIALIQRGTCNFEQKAENAAAAGAAGVIIFNQGNTDDRKGLENVTVGESYEG--------------------------GIPVIFATYDNGVAW--------------------SQTPDLQLHLVVDVVRKKTETYNVVAETR-RGNPNNVVMVGAHLDSVFEGPGINDNGSGSAAQLEMAVLLAKAL------PVNKVRFAWWGAEEAGLVGSTHYVQNLAPEEKKKIKAYLNFDMIGSPNFGNFIYDGDGSDFGLQGPPGSAAIERLFEAYFRLRGQQSEGTEIDFRSDYAEFF-NSGIAFGGLFTGAEGLK--------TEEQAQKYGGTAGKAYDECYHSKCDGIANINQ------DALEIHSDAMAFVTSWLSLSTKVVD-----DEIAAAGQKAQSRSLQMQKSASQIERWGHDFIK------------------------------------------------------------------------------------ |
| 1DE4 Chain:C ((2-636)) | ----------LYWDDLKRKLSEKLDSTDFTSTIKLLNENSYVP-----------------------------------------REAGSQKDENLALYVENQFREFKLSKVWRDQHFVKIQVKDSAQNSVIIVDKNGRLVYLVENPGGYVAYSKAATVTGKLVHANFG--------TKKDFEDLYTPVNGSIVIVRAGKITFAEKVANAESLNAIGVLIYMDQTKFPIVNAELSFFGHAHLGTGDPYTPGFPSFNHTQFPPSRSSGLPNIPVQTISRAAAEKLFGNMEGDCPSDWKTDSTCRMVTSESKNVKLTVSNVLKEIKILNIFGVIKGFVEPDHYVVVGAQRDAW--GPGAAKSGVGTALLLKLAQMFSDMVLKDGFQPSRSIIFASWSAGDFGSVGATEWLEGYLSSLHLKAFTYINLDKAVLGTSNFKVSASPLLYTLIEKTMQNVKHPVTGQFLYQDSNWASKVEKLTLDNAAFPFLAYSGIPAVSFCFCEDTDYPYLGTTMDTYKELIERIPELNKVARAAAEVAGQFVIKLTHDVELNLDYERYNSQLLSFVRDLNQYRADIKEMGLSLQWLYSARGDFFRATSRLTTDFGNAEKTDRFVMKKLNDRVMRVEYHFLSPYVSPKESPFRHVFWGSGSHTLPALLENLKLRKQNNGAFNETLFRNQLALATWTIQGAANALSGDVWDI |
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General information:
TITO was launched using:
| RESULT:
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Template: 1DE4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -21922 for 3995 contacts (-5.5/contact) +
2D Compatibility (PS) -51600 + (NN) -20763 + (LL) 3008
1D Compatibility (HY) -12400 + (ID) 4200
Total energy: -107877.0 ( -27.00 by residue)
QMean score : 0.352
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