Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)


Input alignment information:
Query sequenceMIEPNLRGNGKVALVTGAARGIGLGISAWLIAEGWQVVLADNDRERGARVAEAL----GEHAWFVAMDVAQEGQVAMSVAEVLGQFGRLDGLVCNAAIANPRNTPLEALSLGEWTRTLAVNLTGPMLLAKYC-TPYLRAHNGAIVNIASTRAHQSEPDSEAYAASKGGLLALTHALAASLGP-DIRVNALSPGWIDTREAAEREAAPLTELDHDQHLVGRVGTVEDVASLVAWLLSEDAGFVTGQEFLVDGGMTRKMIYLD
2PNF Chain:A ((3-247))-----IKLQGKVSLVTGSTRGIGRAIAEKLASAGSTVIITGTSGERAKAVAEEIANKYGVKAHGVEMNLLSEESINKAFEEIYNLVDGIDILVNNAGIT--RDKLFLRMSLLDWEEVLKVNLTGTFLVTQNSLRKMIKQRWGRIVNISSVVGFTGNVGQVNYSTTKAGLIGFTKSLAKELAPRNVLVNAVAPGFIETDMTAVL-SEEIKQKYKEQIPLGRFGSPEEVANVVLFLCSELASYITGEVIHVNGGM--------


General information:
TITO was launched using:
RESULT:

Template: 2PNF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output 		3D Compatibility (PKB) -138290 for 2048 contacts (-67.5/contact) +
2D Compatibility (PS) -25755 + (NN) -13434 + (LL) 1000
1D Compatibility (HY) -20000 + (ID) 4200
Total energy: -200679.0 ( -97.99 by residue)
QMean score : 0.556

(partial model without unconserved sides chains):
PDB file : Tito_2PNF.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2PNF-query.scw
PDB file : Tito_Scwrl_2PNF.pdb: