Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSKQILVLPGDGIGPEIMAEAVKVLELANDRFQLGFELAEDVIGGAAID---KHGVPLADQTLQRARQADAVLLGAVGGPKWDRIERDIRPERGLLKIRSQLGLFANLRPAILYPQLAAASSLKPEVVAGLDILIVRELT-------GGIYFGQPREQRVLENGERQAYDTLPYSESEIRRIARVGFDMARVRNNR-LCSVDKANVLA-SSQLWREVVEEVAKDYPDVELSHMYVDNAAMQLVRAPKQFDVMVTDNMFGDILSDEASMLTGSIGMLPSASLDA--NNKGMYEPCHGSAPDIAGQGIANPLATILSVSMMLRY----SFSQATAADAIEQAVSKVLDQGLRTGDIWSEGCRKVGTREMGDAVVAALKNL |
| 3FMX Chain:X ((5-363)) | -SFRIAAIPGDGIGLEVLPEGIRVLEAAALKHGLALEF--DTFEWASCDYYLQHGKMMPDDWAEQLKQYDAIYFGAVGWP--DKVPDHISLWGSLLKFRREFDQYVNIRPVRLFPGVPCA--LANRKVGDIDFVVVRENTEGEYSSLGGIMFENTENEIVIQES--------IFTRRGVDRILKYAFDLAEKRERKHVTSATKSNGMAISMPYWDKRTEAMAAHYPHVSWDKQHIDILCARFVLQPERFDVVVASNLFGDILSDLGPACAGTIGIAPSANLNPERNFPSLFEPVHGSAPDIFGKNIANPIAMIWSGALMLEFLGQGDERYQRAHDDMLNAIERVIADGSVTPDMGG----TLSTQQVGAAISDTLARL |
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General information:
TITO was launched using:
| RESULT:
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Template: 3FMX.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -181361 for 2905 contacts (-62.4/contact) +
2D Compatibility (PS) -36704 + (NN) -12839 + (LL) 1420
1D Compatibility (HY) -26000 + (ID) 6250
Total energy: -261734.0 ( -90.10 by residue)
QMean score : 0.572
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