Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMRVILLGAPGAGKGTQARFITEKFGIPQISTGDMLRAAVKAGSPLGQQVKGVMDSGGLVSDDIIIALIKERITEADCAKGFLFDGFPRTIPQAEALKDA----GVTIDHVVEIAVDDEEIVSRIAGRRVHPASGRVYHTEHNPPKVAGKDDVTGEELIQREDDKEETVRHRLSVYHSQTKPLVDFYQKLSAAEGTPKYHSIAGVGSVEQITAKVLSALS
4JLA Chain:A ((1-178))MILVFLGPPGAGKGTQAKRLAKEKGFVHISTGDILREAVQKGTPLGKKAKEYMERGELVPDDLIIALIEEVFPKHGNV---IFDGFPRTVKQAEALDEMLEKKGLKVDHVLLFEVPDEVVIERLSGRRINPETGEVYHVKYNPPP-------PGVKVIQREDDKPEVIKKRLEVYREQTAPLIEYYKK-------------------------------


General information:
TITO was launched using:
RESULT:

Template: 4JLA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -71107 for 1280 contacts (-55.6/contact) +
2D Compatibility (PS) -18873 + (NN) -8256 + (LL) 2424
1D Compatibility (HY) -18000 + (ID) 4450
Total energy: -118262.0 ( -92.39 by residue)
QMean score : 0.501

(partial model without unconserved sides chains):
PDB file : Tito_4JLA.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4JLA-query.scw
PDB file : Tito_Scwrl_4JLA.pdb: