Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNDRLQIEDLLLGDGKEVVKGALITTQYKGTLEDGTLFDSSYE-------RGRPFQCVIGTGRVIKGWDQGLMGMKVGGKRRLFVPSHLAYGER-QVGAHIKPHSNLLFEIELLEVLTRDD
3KZ7 Chain:A ((22-118))
-------------------KGDVVHCWYTGTLPDGTVFDTNIQTSSKKKKNAKPLSFKVGVGKVIRGWDEALLTMSKGEKARLEIEPEWAYGKKGQPDAKIPPNTKLIFEVELVDI-----
General information:
TITO was launched using:
RESULT:
Template:
3KZ7.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -48276 for 584 contacts (-82.7/contact) +
2D Compatibility (PS) -9249 + (NN) 1988 + (LL) 1516
1D Compatibility (HY) -9600 + (ID) 1850
Total energy: -65471.0 ( -112.11 by residue)
QMean score : 0.440
(partial model without unconserved sides chains):
PDB file :
Tito_3KZ7.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3KZ7-query.scw
PDB file :
Tito_Scwrl_3KZ7.pdb
: