Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKKVSTLDLLFVAIMGVSPAAFAADLIDVSKLPSKAAQGAPGPVTLQAAVGAGGADELKAIRSTTLPNGKQVTRYEQFHNGVRVVGEAITEVKGPGKSVAAQRSGHFVANIAADLPGSTTAAVSAEQVLAQAKSLKAQGRKTENDKVELVIRLGENNIAQLVYNVSYLIPGEGLSRPHFVIDAKTGEVLDQWEGLAHAEAGGPGGNQKIGKYTYGSDYGPLIVNDRCEMDDGNVITVDMNSSTDDSKTTPFRFACPTNTYKQVNGAYSPLNDAHFFGGVVFKLYRDWFGTSPLTHK-----LYMKVHYGRSVENAYWDGTAMLFGDG-ATMFYPLVS-LDVAAHEVSHGFTEQNSGLIYRGQSGGMNEAFSDMAGEAAEFYMRGKNDFLIGYDIKK---GSGALRYMDQPSRDGRSIDNASQYYNGID----VHHSSGVYNRAFYLLANS--------PGWDTRKAFEVFVDANRYYWTATSNYNSGACGVIRSAQN----RNYSAADVTRAFSTVGVTCPSAL
4N66 Chain:E ((68-315))---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------APAVDAHYYAGVTYDYYKNVH--NRLSYDGNNAAIRSSVHYSQGYNNAFWNGSQMVYGDGDGQTFIPLSGGIDVVAHELTHAVTDYTAGLIYQNESGAINEAISDIFGTLVEFYANKNPDWEIGEDVYTPGISGDSLRSMSDPAKYGDP-DHYSKRYTGTQDNGGVHINSGIINKAAYLISQGGTHYGVSVVGIGRDKLGKIFYRALTQYLTPTSNFSQLRAAAVQSATDLYGSTSQEVASVKQAFDAVGV------


General information:
TITO was launched using:
RESULT:

Template: 4N66.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -82722 for 1959 contacts (-42.2/contact) +
2D Compatibility (PS) -23047 + (NN) 152 + (LL) 14880
1D Compatibility (HY) -14800 + (ID) 4150
Total energy: -109687.0 ( -55.99 by residue)
QMean score : 0.553

(partial model without unconserved sides chains):
PDB file : Tito_4N66.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4N66-query.scw
PDB file : Tito_Scwrl_4N66.pdb: