Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSEPLILDAP-NADACIIWLHGLGADRTDFKPVAEALQMVLPSTRFILPQAPSQAVTVNGGWVMPSWYDILAFSPARAIDEDQLNASADQVIALIDEQRAKGIAAERIILAGFSQGGAVVLHTAFRRYAQPLGGVLALSTYAPTFDDLA---LDERHKRIPVLHLHGSQDDVVDPALGRAAHDALQAQG-VEVGWHDYPMGHEVSLEEIHDIGAWLRKRL-
1AUO Chain:A ((1-218))
MTEPLILQPAKPADACVIWLHGLGADRYDFMPVAEALQESLLTTRFVLPQAPTRPVTINGGYEMPSWYDIKAMSPARSISLEELEVSAKMVTDLIEAQKRTGIDASRIFLAGFSQGGAVVFHTAFINWQGPLGGVIALSTYAPTFGD--ELELSASQQRIPALCLHGQYDDVVQNAMGRSAFEHLKSRGV-TVTWQEYPMGHEVLPQEIHDIGAWLAARLG
General information:
TITO was launched using:
RESULT:
Template:
1AUO.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -161067 for 1790 contacts (-90.0/contact) +
2D Compatibility (PS) -22780 + (NN) -11568 + (LL) 512
1D Compatibility (HY) -22800 + (ID) 6800
Total energy: -224503.0 ( -125.42 by residue)
QMean score : 0.598
(partial model without unconserved sides chains):
PDB file :
Tito_1AUO.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1AUO-query.scw
PDB file :
Tito_Scwrl_1AUO.pdb
: