Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MQTLLKLLQDGRFHSGEELGAVLGISRSAVWKRLQHLEAEHGLQFHKVRGRGYRLASPLSLLDPRKIDSLWPVEIMPTVDSTNSEAMRRLAAGASTPFVIVAEQQTAGRGRRGRAWVSPYGENLYYSLAITVRGGARELEGLSLVVGLAVLRALESLGVQDTGLKWPNDLLQGGKKIAGILLELSGDPADLCHVVIGIGINVNMKTATDIGQPWTSLREALGELVDRSRLLSALNRQLADYLDRHSREGFAASREEWESC--NLWQGAQV-ILSTALSSIEGRVLGVDSRGALRLEVDGVE-QGFSGGELSLRLRQ |
| 2ZGW Chain:B ((36-234)) | --------------------------------------------------------------------------------------------------VIVADKQTMGHGALN-KWESPEG-GLWLSIVLSPKVPQKDLPKIVFLGAVGVVETLKEFSI-DGRIKWPNDVLVNYKAIAGVLVEGKGD-----KIVLGIGLNVNNKVPNGA----TSMKLELGSEVP---LLSVF-RSLITNLDRLYLNFLKNPMDILNLVRDNMILGVRVKILGDG--SFEGIAEDIDDFGRLIIRLDSGEVKKVIYGDVSLRF-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2ZGW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -124736 for 1471 contacts (-84.8/contact) +
2D Compatibility (PS) -20530 + (NN) -5627 + (LL) 7628
1D Compatibility (HY) -18400 + (ID) 3500
Total energy: -165165.0 ( -112.28 by residue)
QMean score : 0.479
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