Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRPLVATVDLSAIRHNYALAKRCAPQRQA----FAVVKANAYGHGAREVVTALHD-DADGFAVACLEEAAEVRALHASARILLLEGCFEASEYALAGQL-RLDLVIQGAEQGEAFLAAGLDI----PLNVWLKLDSGMHRLGFDPAALRAWHARLR-SHPGVRELNLISHFACADERNHPLTEQQLESFLGLLDLDFDQ----RSLANSAAVLTIPAAHMDWLRPGIMLYGSTPLADLSAA-ELGLKPAMSLGAQLISLREVAVGESVGYGATWIAERPARIGTVSCGYADGYPRTAPAGTPVLVGGRRAILAGRVSMDMLAVDLSDLPEARVGDPVELWGAGLSVDEVARACGTLGYELLSKVTARVPRRYSH |
| 1BD0 Chain:A ((12-244)) | -------VDLDAIYDNVENLRRLLPD---DTHIMAVVKANAYGHGDVQVARTALEAGASRLAVAFLDEALALREKGIE-APILVLGASRPADAALAAQ-QRIALTVFRSDWLEEASALY---SGPFPIHFHLKMDTGMGRLGVKDEEETKRIVALIERHPHFVLEGLYTHFATADEVNTDYFSYQYTRFLHMLEWLPS-RPPLVHCANSAASLRFPDRTFNMVRFGIAMYGLAPSPGIKPLLPYPLKEA----------------------------------------------------------------------------------------------------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1BD0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -119260 for 1773 contacts (-67.3/contact) +
2D Compatibility (PS) -23535 + (NN) -8021 + (LL) 9472
1D Compatibility (HY) -13200 + (ID) 3900
Total energy: -158444.0 ( -89.36 by residue)
QMean score : 0.438
|
|
|