Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTMNDEPQSSSLDNFWMPFTANRQF--KARPRLLESAEGIHYIAQGGRRILDGTAGLWCCNAGHGRREISEAVARQIATLDYAPPFQMGHPLPFELAARLTEIAPPS-LNKVFFTNSGSESADTALKIALAYQRAIGQGTRTRLIGRELGYHGVGFGGLSVGGMVNNRKAFSANLLPGVDHLPHTLDVARNAFTVGLPEHGVEKAEELERLVTLHGAENIAAVIVEPMSGSAGVVLPPKGYLQRLREITRKHGILLIFDEVITGFGRVGEAFAAQR-WGVVPDLLTCAKGLTNGSIPMGAVFVDEKIHAAFMQGPQGAIEFFHGYTYSGHPVACAAALATLDIYRRDDLFQRAVELEGYWQDALF-SLRDLPNVVDIRAVGLVGGVQLAPHADGP----GKRGYDVFERCFWEHDLMVRVTGDIIAMSPPLIIDKPHIDQIVERLAQAIRASV |
| 3I5T Chain:A ((14-454)) | ------VGAAMRDHILLPAQEMAKLGKSA-QPVLTHAEGIYVHTEDGRRLIDGPAGMWCAQVGYGRREIVDAMAHQAMVLPYASPWYMATSPAARLAEKIATLT-PGDLNRIFFTTGGSTAVDSALRFSEFYNNVLGRPQKKRIIVRYDGYHGSTALTAACTGRTGNWPNF-DIAQDRISFLSSPNPR-HAG-NRSQEAFLDDLVQEFEDRIESLGPDTIAAFLAEPILASGGVIIPPAGYHARFKAICEKHDILYISDEVVTGFGRCGEWFASEKVFGVVPDIITFAKGVTSGYVPLGGLAISEAVLARISGENAKGSWFTNGYTYSNQPVACAAALANIELMEREGIVDQAREMADYFAAALASLR-DLPGVAETRSVGLVGCVQCLLD---GTAEDKAFTLKIDERCFE-LGLIVRPLGDLCVISPPLIISRAQIDEMVAIMRQAITEV- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3I5T.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -274213 for 3706 contacts (-74.0/contact) +
2D Compatibility (PS) -46958 + (NN) -21772 + (LL) 916
1D Compatibility (HY) -29200 + (ID) 8000
Total energy: -379227.0 ( -102.33 by residue)
QMean score : 0.530
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