Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSKVSALVVDDAPFIRDLMKKGLRD-NFPGLHIEEAVNGRKAQQLLSRQNVDLILCDWEMPEMSGLELLTWCRAQENLKTTPFIMVTSRGDKENVVQAIQAGVSDYIGKPFSNDQLVAKIKKALSRSGKLEALAAHAPRREIASGMANDSLAALTGGRAEVIKPAASPAKPAPAPKPASAPQASARPAGSGNPLGQAQLRLPQSSMPCVIKAVSLKEAQLVVKRADPLPQVLESAVLDLEENSDVARLNGYLHAIAALEPKPDSDWLLLTLRFVDRDPQKLDYLSRLIARGSTQKHYVPGA |
| 3OLY Chain:A ((9-128)) | ------LVVDDFSTMRRIVRNLLKELGFN--NVEEAEDGVDALNKLQAGGYGFVISDWNMPNMDGLELLKTIRADGAMSALPVLMVTMEAKKENIIAAAQAGASGYVVKPFTAATLEEKLNKIFEKLG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3OLY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -74049 for 920 contacts (-80.5/contact) +
2D Compatibility (PS) -12892 + (NN) -9364 + (LL) 11256
1D Compatibility (HY) -10400 + (ID) 2300
Total energy: -97749.0 ( -106.25 by residue)
QMean score : 0.698
|
|
|