Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSRSIKKGPFIDDHLMKKTLKAKEGKDNRPIKTWSRRSTILPEMIGFTYNVHNGRVFVPVYITENHVGYKLGEFAPTRTFKGHKGSVQKKIGK
1QKF Chain:A ((8-80))
-------GVFVDDHLLEKVLELNAKGEKRLIKTWSRRSTIVPEMVGHTIAVYNGKQHVPVYITENMVGHKLGEFAPTRTY-------------
General information:
TITO was launched using:
RESULT:
Template:
1QKF.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -30796 for 516 contacts (-59.7/contact) +
2D Compatibility (PS) -7852 + (NN) -4876 + (LL) 920
1D Compatibility (HY) -6800 + (ID) 2350
Total energy: -51754.0 ( -100.30 by residue)
QMean score : 0.477
(partial model without unconserved sides chains):
PDB file :
Tito_1QKF.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1QKF-query.scw
PDB file :
Tito_Scwrl_1QKF.pdb
: