Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequence-MKKVRKSFVLLLTGLLAVLILSACGQKTQQDIVAGLDEKAKEYTSYKAKAKMTIETGSEPQVYNVEIWHKKPSLYRVYLENPKKDQNQVILRNENGVFVLTPSLNKSFRFQSDWPNNSSQVYLFESLVKDVQNDSDAVFTAKEKKYVFETKTNYQHNKMLPTQEITFNKKDMSPSSVKVMDTDRKVMVKVEFSSFEFNKQFDKESFDEKKNMTLSQMDVATSAKPSDTFAVKTPLELPLGVKLLEEKDISTEDGKRIIMTYGGEKSFTLIQEKAQIAKASSSVTLNGEPVNLGYTIGALSDASLSWTYDGVDYLLSSKDLSKEEMVTVAKSMQGQSSK
4P0P Chain:B ((62-389))RMKAQRPE--ECLKHIIVVLDPVLLQMEGGGQLLGALQTM---------ECRCVIE---AQAVPCSVTWRRRA--------GPSEDRED--WVEEPTVLVLLR----AEAFVSMIDNGKTLQGFVTDITAKTAGKALSLVIVDQEK---------CFVSRVDAEEALVDLQLHTEAQAQIVQSWKEL---ADFTCAFTKAVAEAPFKKLRDETTFSFCLESDWAGGVKVDLAGRGLALVWRRQIQQLNRVSLEMASAVVNAY---------PSPQLLVQAYQQCFSDKERQNL------LADIQVRRTSRRIGPELSRRIYLQMT------TLQPHLSL


General information:
TITO was launched using:
RESULT:

Template: 4P0P.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 1054 -83131 -78.87 -300.11
target 2D structure prediction score : 0.44
Monomeric hydrophicity matching model chain B : 0.63

3D Compatibility (PKB) : -78.87
2D Compatibility (Sec. Struct. Predict.) : 0.44
1D Compatibility (Hydrophobicity) : 0.63
QMean score : 0.249

(partial model without unconserved sides chains):
PDB file : Tito_4P0P.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4P0P-query.scw
PDB file : Tito_Scwrl_4P0P.pdb: