Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MRTSPMPAKFRSVRVVVITGSVTAAPVRVSETLRRLIDVSVLAENSGREPADERRGDFSAHTEPYRRELLAHCYRMTGSLHDAEDLVQETLLRAWKAYEGFAGKSSLRTWLHRIATNTCLTALEGRRRRPLPTGLGRPSADPSGELVERREVSWLEPLPDVTDDPADPSTIVGNRESVRLAFVAALQHLSPRQRAVLLLRDVLQWKSAEVADAIGTSTVAVNSLLQRARSQLQTVRPSAADRLSAPDSPEAQDLLARYIAAFEAYDIDRLVELFTAEAIWEMPPYTGWYQGAQAIVTLIHQQCPAYSPGDMRLISLIANGQPAAAMYMRAGDVHLPFQLHVLDMAADRVSHVVAFLDTTLFPKFGLPDSL |
4G97 Chain:A ((2-132)) | --------------------------------------------------------TLSTRIAPHLPYLRRFSRALTGSQSSGDAYVAAALEALIADVGIFPEASSDRIGLYRLFCNLYK--------------------------------------------------------------------IAPLPRQAFLLVAVEGFNDHEAAEILEVDQAEFGRLLSTASG-------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4G97.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -61315 for 781 contacts (-78.5/contact) +
2D Compatibility (PS) -11825 + (NN) -7598 + (LL) 18000
1D Compatibility (HY) -3600 + (ID) 1250
Total energy: -67588.0 ( -86.54 by residue)
QMean score : 0.592
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