Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTEYKLVVVGAGGVGKSALTIQLIQNHFV--DEYDPTIEDSYRKQVVIDGETCLLDILDTAGQE-EYSAMRDQYMRTGEGFLCVFAINNTKSFEDIHHYREQIKRVKDSEDVPMVLVGNKCDLP-SRTVDTKQAQDLARSYGIPFIETSAKTRQRVEDAFYTLVREIRQYRLKKISKEEKTPGCVKIKKCIIM
2G3Y Chain:A ((36-205))
-TYYRVVLIGEQGVGKSTLANIFAGVHDSMDSD---LGEDTYERTLMVDGESATIILLDMWENKGENEWLHDHCMQVGDAYLIVYSITDRASFEKASELRIQLRRARQTEDIPIILVGNKSDLVRCREVSVSEGRACAVVFDCKFIETSAAVQHNVKELFEGIVRQVRLRR----------------------
General information:
TITO was launched using:
RESULT:
Template:
2G3Y.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -93404 for 1256 contacts (-74.4/contact) +
2D Compatibility (PS) -18047 + (NN) -7403 + (LL) 1956
1D Compatibility (HY) -12400 + (ID) 2850
Total energy: -132148.0 ( -105.21 by residue)
QMean score : 0.499
(partial model without unconserved sides chains):
PDB file :
Tito_2G3Y.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2G3Y-query.scw
PDB file :
Tito_Scwrl_2G3Y.pdb
: