Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSTSAIFFSEGSYIVIMNNIIVKKFGGTSL---TDLTRVANLIKKDVDKGYRIIVVVSAIAGLTDQMVFQAR---------------QTLNLSHKQALSE---------------------------------------YDVMLSAGEQISCGLLAITLLSIGVNAKSWLAWQLPIITDNSYSESKIKTIKIDHLKRSFAEGYTVAIIAGFQGIYDD-RITTFGRGGSDISAVALAVAFGVRVCEIFTDIDGIYTADPKIVPKARKLKSISYDEMLEMSSSGAKILHNRSVQLAMKHNIKVQVLSTFKEVEGTAVLHENDVLERHTITGITYSTNEALITFT------NFANTLRTLKDMAGANIKIDMIHGS------SIVISEFDIDLMKELLNKN-----------EDYVINNNAAKISIIGIGVMS---VMYHTLKFFSEKKIEILAIT--ASEIKISIIVQRECAEALVRDLHTELMCTEGG |
| 3C1M Chain:A ((2-470)) | -------------------TTVMKFGGTSVGSGERIRHVAKIVTKRKKEDDDVVVVVSAMSEVTNALVEISQQALDVRDIAKVGDFIKFIREKHYKAIEEAIKSEEIKEEVKKIIDSRIEELEKVLIGVAYLGELTPKSRDYILSFGERLSSPILSGAIRDLGEKSIALEGGEAGIITDNNFGSARVKRLEVKERLLPLLKEGIIPVVTGFIGTTEEGYITTLGRGGSDYSAALIGYGLDADIIEIWTDVSGVYTTDPRLVPTARRIPKLSYIEAMELAYFGAKVLHPRTIEPAMEKGIPILVKNTFEPESEGTLITNDMEMSDSIVKAISTIKNVALINIFGAGMVGVSGTAARIFKALGEEEVNVILISQGSSETNISLVVSEEDVDKALKALKREFGDSFLNNNLIRDVSVDKDVCVISVVGAGMRGAKGIAGKIFTAVSESGANIKMIAQGSSEVNISFVIDEKDLLNCVRKLHEKFIEK--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3C1M.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -328023 for 3351 contacts (-97.9/contact) +
2D Compatibility (PS) -41336 + (NN) -17095 + (LL) 1192
1D Compatibility (HY) -25600 + (ID) 5450
Total energy: -416312.0 ( -124.24 by residue)
QMean score : 0.523
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