Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MNKKALLELSNGLKIELPVLSGTMGYDVLNIKDLYKVTGLLTYDPGFVSTASCSSAITFIDGDEGVLRYRGHDIADLAQSNDFTAVIYLLLYGKLPNLEQHKKFFLKIQELSKVPEQVVNVIKAFPKTAHPMSILIACFATLSALYHERYGNNVSNENLDFGISAIAQVPAIIAMVYRHTNDQEFIDTDNELNYSKSFLRMMFGNALDNDKSTLFAKALDKIFTLHADHEQNASTAAVRVVGSAGSNLFACLSAGVATLWGPVHGGANESVINMLKEIEQSGNVDKFIEKAKDDKDPFKLMGFGHRVYKNYDPRARILKDACDEILNKLEQDSKLLKIAKELEKIALKDEYFVVRKLYPNVDFYSGIIMNAINIPPSMFTPIFALARTTGWVTQWYEMINDKETKICRPRQLYVGK |
2P2W Chain:A ((2-352)) | ------------------------------------------IQKGLEGVKICESSICYLDGINGRLYYRGIPVEELAEKSTFEETAYFLWYGKLPTKSELEEFKRKMADYRELPAEALGILYHLPKNLHYIDVLKIFLSIH-------------EDLREKAIRVASVFPTILAYYYRYSKGKELIRPRKDLSHVENFYYMMFGER------NEKIRLLESAFILLMEQDINASTFAALVIASTLSDLYSCIVGALGALKGPLHGGASEKVPPMLEEIGSEDRVEEFVQKCLKEK--RKIMGFGHRVYKTYDPRAVFLKRVLQEHFP----DSKLFRIASKLEEYIVSN---KIKNIYPNVDLYSSVLFEELGFPRNMFTALFATARVVGWTAHVIEYVSD--NKLIRPTSEYVGP |
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General information:
TITO was launched using:
| RESULT:
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Template: 2P2W.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -236770 for 2873 contacts (-82.4/contact) +
2D Compatibility (PS) -36851 + (NN) -13086 + (LL) 4176
1D Compatibility (HY) -31200 + (ID) 6150
Total energy: -319881.0 ( -111.34 by residue)
QMean score : 0.547
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