Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNEERYSTKRITVKEIDEILYEEHRVLDHGFIRVVDYMGSDSAIVQAARVSYGKGTKQINQDEVLIKYLMRYHHTTPFEMCEIKFHVKLPIFIARQWIRHRTANVNEYSARYSILDHEFYIPEPEQVAKQSDNNKQGSGEAFDLDISKEIIDSLIND-SNLVYSHYNKFIEQGLTREIARTNLTLNYYTQFYWKVDLHNLLHFLKLRADKRAQHEIRVYAEVILDIVKKWVPLVHSAFVEYCLESACISRTGLGIIRKLIRGENVTREESNIGKREWEELMFILDKQPER
3N0B Chain:A ((17-221))
-------------------------ILDKGFVELVDVMGNDLSAVRAARVSFDMGLKDEERDRHLIEYLMKHGHETPFEHIVFTFHVKAPIFVARQWFRHRIASYNELSGRYSKLSYEFYIPSPERL------------EGYKTTIPPERVTEKISEIVDKAYRTYLELIESGVPREVARIVLPLNLYTRAFATVNARSLMNFLNLRADSHAQWEIQQYALAIARIFKEKCPWTFEAFLKYAYKGDIL------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
3N0B.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -163842 for 1525 contacts (-107.4/contact) +
2D Compatibility (PS) -21326 + (NN) -1850 + (LL) 5784
1D Compatibility (HY) -17600 + (ID) 4800
Total energy: -203634.0 ( -133.53 by residue)
QMean score : 0.433
(partial model without unconserved sides chains):
PDB file :
Tito_3N0B.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3N0B-query.scw
PDB file :
Tito_Scwrl_3N0B.pdb
: