Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MIEKSQACHDSLLDSVGQTPMVQLHQLFPKHEVFAKLEYMNPGGSMKDRPAKYIIEHGIKHGLITENTHLIESTSGNLGIALAMIAKIKGLKLTCVVDPKISPTNLKIIKSYGANVEMVEEPDAHGGYLMTRIAKVQELLATIDDAY-WINQYANELNWQSHYHGAGTEIVETIKQPIDYFVAPVSTTGSIMGMSRKIK--EGHPNAQIVAVDAKGSVIFGD-------KPINRELPGIGASRVPEILNRSEINQVIHVDDYQSALGCRKLIDYEGIFAGGSTGSIIAAIEQLITSIEEGAT---IVTILPDRGDRYLDLVYSDTWLEKMKSRQGVKSE |
1FCJ Chain:D ((10-302)) | --------------TIGHTPLVRLNRIG-NGRILAKVESRNPSFSVKCRIGANMIWDAEKRGVLKPGVELVEPTNGNTGIALAYVAAARGYKLTLTMPETMSIERRKLLKALGANLVLTEGAKGMKGA----IQKAEEIVASDPQKYLLLQQFSNPANPEIHEKTTGPEIWEDTDGQVDVFISGVGTGGTLTGVTRYIKGTKGKTDLITVAVEPTDSPVIAQALAGEEIKPGPHKIQGIGAGFIPGNLDLKLIDKVVGITNEEAISTARRLMEEEGILAGISSGAAVAAALKL--QEDESFTNKNIVVILPSSG------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1FCJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -142456 for 2555 contacts (-55.8/contact) +
2D Compatibility (PS) -30246 + (NN) -10092 + (LL) 3488
1D Compatibility (HY) -15600 + (ID) 4800
Total energy: -199706.0 ( -78.16 by residue)
QMean score : 0.394
|
|
|