Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTKTKIMGILNVTPDSFSDGGK-FNNVETAINRVKAMIDEG-----ADIIDVGGVSTRPGHEMVTLEEELNRVLPVVEAI------VGFDVKISVDTFRSEVAEACLKLGVDMINDQWAGLYDHRMFQIVAKYDAEII---------------LMHNGNGNRDEPVVEEML--------------TSLLAQAHQ--------AKIAGIPSNKIWLDPGIGFAKTRNEEAEVMARLDELVATEY----------------PVLLATSRKRFTKEMMGYDTTPVERDEVTAATTAYGIMKGVRAVRVHNVELNAKLAKGIDFLKENENARHNLS |
| 2BMB Chain:A ((222-538)) | VSPTYIMAIFNATPDSFSDGGEHFADIESQLNDIIKLCKDALYLHESVIIDVGGCSTRPNSIQASEEEEIRRSIPLIKAIRESTELPQDKVILSIDTYRSNVAKEAIKVGVDIINDISGGLFDSNMFAVIAE-NPEICYILSHTRGDISTMNRLAHYENFALGDSIQQEFVHNTDIQQLDDLKDKTVLIRNVGQEIGERYIKAIDNGVKRWQILIDPGLGFAKTWKQNLQIIRHIPILKNYSFTMNSNNSQVYVNLRNMPVLLGPSRKKFIGHITK-DVDAKQRDFATGAVVASCIGFGSDMVRVHDVKNCSKSIKLAD------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2BMB.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -81962 for 1987 contacts (-41.2/contact) +
2D Compatibility (PS) -28161 + (NN) -20545 + (LL) 960
1D Compatibility (HY) -17200 + (ID) 5000
Total energy: -151908.0 ( -76.45 by residue)
QMean score : 0.537
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