Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEHTIAVIPGSFDPITYGHLDIIERSTDRFDEIHVCVLKNSKKEGTFSLEERMDLIEQSVKHLPNVKVHQFSGLLVDYCEQVGAKTIIRGLRAVSDFEYELRLTSMNKKLNNEIETLYMMSSTNYSFISSSIVKEVAAYRADISEFVP----PYVEKALKKKFK
3NV7 Chain:A ((4-157))
----VGIYPGTFDPVTNGHIDIIHRSSELFEKLIVAVAHSSAKNPMFSLDERLKMIQLATKSFKNVECVAFEGLLAYLAKEYHCKVLVRGLRVVSDFEYELQMGYANKSLNHELETLYFMPTLQNAFISSSIVRSIIAHKGDASHLVPKEIYPLISKA------
General information:
TITO was launched using:
RESULT:
Template:
3NV7.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -87497 for 918 contacts (-95.3/contact) +
2D Compatibility (PS) -16037 + (NN) -4954 + (LL) 972
1D Compatibility (HY) -15200 + (ID) 3450
Total energy: -126166.0 ( -137.44 by residue)
QMean score : 0.455
(partial model without unconserved sides chains):
PDB file :
Tito_3NV7.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3NV7-query.scw
PDB file :
Tito_Scwrl_3NV7.pdb
: