Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMFKDFFNRTKKKKYLTVQDSKNNDVPAGIMTKCPKCKKIMYTKELAENL----NVCFNCDHHIALTAYKRIEAISDEGSFTEFDKGMTSANPLDFPSYLEKIEKDQQKTGLKEAVVTGTAQLDGMKFGVAVMDSRFRMGSMGSVIGEKICRIIDYCTENRLPFILFSASGGARMQEGIISLMQMGKTSVSLKRHSDAGLLYISYLTHPTTGGVSASFASVGDINLSEP-KALIGFAGRRVIEQTINEKLP-DDFQTAE-FLLEHGQLDKVVHRN-DMRQTLSEILKIHQEVTK
3N6R Chain:B ((26-270))------------------------------------LEQLEDRRAAARLGGGQKRIDAQHGRGKLTARERVDLLLDEGSFEEFDMFVTH-RCTDFNM--------QDQKPAGDGVVTGWGTINGRVVYVFSQDFTVLGGSVSETHSKKICKIMDMAMQNGAPVIGINDSGGARIQEGVDSLAGYGEVFQRNI-MASGVVPQISMIMGPCAGGAVY-SPAMTDFIFMVKDSSYMFVTGPDVVKTVTNEQVSAEELGGATTHTRKSSVADAAFENDVEALAEVRRLVDFLPLNN-


General information:
TITO was launched using:
RESULT:

Template: 3N6R.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -71149 for 1997 contacts (-35.6/contact) +
2D Compatibility (PS) -25601 + (NN) -8285 + (LL) 2876
1D Compatibility (HY) -5200 + (ID) 2900
Total energy: -110259.0 ( -55.21 by residue)
QMean score : 0.383

(partial model without unconserved sides chains):
PDB file : Tito_3N6R.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3N6R-query.scw
PDB file : Tito_Scwrl_3N6R.pdb: