Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MFKDFFNRTKKKKYLTVQDSKNNDVPAGIMTKCPKCKKIMYTKELAENL----NVCFNCDHHIALTAYKRIEAISDEGSFTEFDKGMTSANPLDFPSYLEKIEKDQQKTGLKEAVVTGTAQLDGMKFGVAVMDSRFRMGSMGSVIGEKICRIIDYCTENRLPFILFSASGGARMQEGIISLMQMGKTSVSLKRHSDAGLLYISYLTHPTTGGVSASFASVGDINLSEP-KALIGFAGRRVIEQTINEKLP-DDFQTAE-FLLEHGQLDKVVHRN-DMRQTLSEILKIHQEVTK |
3N6R Chain:B ((26-270)) | ------------------------------------LEQLEDRRAAARLGGGQKRIDAQHGRGKLTARERVDLLLDEGSFEEFDMFVTH-RCTDFNM--------QDQKPAGDGVVTGWGTINGRVVYVFSQDFTVLGGSVSETHSKKICKIMDMAMQNGAPVIGINDSGGARIQEGVDSLAGYGEVFQRNI-MASGVVPQISMIMGPCAGGAVY-SPAMTDFIFMVKDSSYMFVTGPDVVKTVTNEQVSAEELGGATTHTRKSSVADAAFENDVEALAEVRRLVDFLPLNN- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3N6R.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -71149 for 1997 contacts (-35.6/contact) +
2D Compatibility (PS) -25601 + (NN) -8285 + (LL) 2876
1D Compatibility (HY) -5200 + (ID) 2900
Total energy: -110259.0 ( -55.21 by residue)
QMean score : 0.383
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