Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSKVHVFDHPLIQHKLSYIRDVNTGTKEFRELVDEVGMLMAYEVTRDLELQDVDIETPVTKMTAKRLAGKKLAIVPILRAGLGMTDGILSLVPAARVGHIGLYRDPETLKAVEYFAKLPQDITERQIIVVDPMLATGASAIEAITSLKKRGAKNIRFMCLIAAPEGVEKMHEAHPDVDIYIAALDEKLNDKAYITPGLGDAGDRLFGTK
2EHJ Chain:A ((1-208))
-KKIVEVKHPLVKHKLGLMREQDISTKRFRELASEVGSLLTYEATADLETEKVTIEGWNGPVEIDQIKGKKITVVPILRAGLGMMDGVLENVPSARISVVGMYRNEETLEPVPYFQKLVSNIDERMALIVDPMLATGGSVIATIDLLKKAGCSSIKVLVLVAAPEGIAALEKAHPDVELYTASIDQGLNEHGYIIPGLGDAGDKIFGTK
General information:
TITO was launched using:
RESULT:
Template:
2EHJ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -164229 for 1679 contacts (-97.8/contact) +
2D Compatibility (PS) -22072 + (NN) -2129 + (LL) 208
1D Compatibility (HY) -21600 + (ID) 5350
Total energy: -215172.0 ( -128.15 by residue)
QMean score : 0.520
(partial model without unconserved sides chains):
PDB file :
Tito_2EHJ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2EHJ-query.scw
PDB file :
Tito_Scwrl_2EHJ.pdb
: