Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKKLIFLIVIALVLSACNSNSSHAKELNDLEKKYNAHIGVYALDTKSGKEVKFNSDKRFAYASTSKAINSAILLEQVPYNK--LNKKVHINKDDIVAYSPILEKYVGKDITLKELIEASMTYSDNTANNKIIKEIGGIKKVKQRLKELGDKVTNPVRYEIELNYYSPKSKKDTSTPAAFGKTLNKLIANGKLSKKNKNFLLDLMFNNKNGDTLIKDGVPKDYKVADKSGQAITYASRNDVAFVYPKGQSEPIVLVI-FTNKDNKSDKPNDKLISETAKSVMKEF |
| 4X69 Chain:A ((6-262)) | ------------------------QQLEALEKSSGGRLGVALINTADNSQILYRADERFAMCSTSKVMAAAAVLKQSESDKHLLNQRVEIKKSDLVNYNPIAEKHVNGTMTLAELGAAALQYSDNTAMNKLIAHLGGPDKVTAFARSLGDETFRLDRTEPTLNTAIPGDPRDTTTPLAMAQTLKNLTLGKALAETQRAQLVTWLKGNTTGSASIRAGLPKSWVVGDKTGSG-DYGTTNDIAVIWPENHA-PLVLVTYFTQPEQKAERRRD-ILAAAAKIVTHGF |
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General information:
TITO was launched using:
| RESULT:
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Template: 4X69.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -33928 for 2286 contacts (-14.8/contact) +
2D Compatibility (PS) -27683 + (NN) -13271 + (LL) 2800
1D Compatibility (HY) -14000 + (ID) 4750
Total energy: -90832.0 ( -39.73 by residue)
QMean score : 0.801
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