Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTKIAMANFKSAMPVFKSHAYLKELEKTLKPQHFDRVFVFPDFLGLLPNAFLHFTLGAQNAYPRDCGAFTGEITSKHLEELKIHTLLIGHSERRVLLKESPSFLKEKFDFFKGKNFKIVYCIGEDLTTREKGFRAVKEFLSEQLEN-IDL--NYSNLIVAYEPIWAIGTKKSASLEDIYLTHGFLKQILN--------QKTPLLYGGSVNAQNAKEILGIDSVDGLLIGSASLELENFKTIISFL
1O5X Chain:B ((59-244))
-----------------------------------------------------FSTGIQNVSKFGNGSYTGEVSAEIAKDLNIEYVIIGHFERRKYFHETDEDVREKLQASLKNNLKAVVCFGESLEQREQN--KTIEVITKQVKAFVDLIDNFDNVILVYEPLWAIGTGKTATPEQAQLVHKEIRKIVKDTCGEKQANQIRILYGGS------SSLIQQEDIDGFLVGNASLK-ESFVDIIKSA
General information:
TITO was launched using:
RESULT:
Template:
1O5X.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -73757 for 1237 contacts (-59.6/contact) +
2D Compatibility (PS) -17637 + (NN) -3275 + (LL) 5168
1D Compatibility (HY) -13200 + (ID) 3250
Total energy: -105951.0 ( -85.65 by residue)
QMean score : 0.567
(partial model without unconserved sides chains):
PDB file :
Tito_1O5X.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1O5X-query.scw
PDB file :
Tito_Scwrl_1O5X.pdb
: