Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSNQASHLDNFMNAKNPKSFFDNKGNTKFIAITSGKGGVGKSNISANLAYSLYKKGYKVGVFDADIGLANLDVIFGVKTHK--NILHALKGEAKLQEIICEIE--PGLCLIPGDSGEEILKYISGAEALDRFVDEEGVLSSLDYIVIDTGAGIGATTQAFLNASDCVVIVTTPDPSAITDAYACIKI------NSKNKDELFLIANMVAQPKEGRATYERLFKVAKNNIASLELHYLGAIENSSLLKRYVRERKILRKIAPNDLFSQSIDQIASLLVSKLETGTLEIPKEGLKSFFKRLLKYLG |
| 3Q9L Chain:A ((2-258)) | --------------------------ARIIVVTSGKGGVGKTTSSAAIATGLAQKGKKTVVIDFAIGLRNLDLIMGCERRVVYDFVNVIQGDATLNQALIKDKRTENLYILPASQTRD--KDALTREGVAKVLDDLKAMD-FEFIVCDSPAGIETGALMALYFADEAIITTNPEVSSVRDSDRILGILASKSRRAENGEEPIKEHLLLTRYNPGRVSRGDMLS-MEDVLEILRIKLVGVIPEDQSVLRASNQGEPVILDINADAGKAYADTVERLLGE-------ERPFRFIEE---------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3Q9L.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -130391 for 2168 contacts (-60.1/contact) +
2D Compatibility (PS) -25927 + (NN) -2556 + (LL) 2540
1D Compatibility (HY) -12000 + (ID) 3150
Total energy: -171484.0 ( -79.10 by residue)
QMean score : 0.502
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