Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSHYIELTEENFESTI--KKGVALVDFWAPWCGPCKMLSPVIDELASEYEGKAKICKVNTDEQEELSAKFGIRSIPTLLFTKDGEVVHQLVGVQTKVALKEQLNKLLG
3O6T Chain:C ((9-114))
-SATIKVTDASFATDVLSSNKPVLVDFWATWCGPSKMVAPVLEEIATERATDLTVAKLDVDTNPETARNFQVVSIPTLILFKDGQPVKRIVGAKGKAALLRELSDVVP
General information:
TITO was launched using:
RESULT:
Template:
3O6T.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -70258 for 765 contacts (-91.8/contact) +
2D Compatibility (PS) -11060 + (NN) -4312 + (LL) 208
1D Compatibility (HY) -8400 + (ID) 2000
Total energy: -95822.0 ( -125.26 by residue)
QMean score : 0.680
(partial model without unconserved sides chains):
PDB file :
Tito_3O6T.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3O6T-query.scw
PDB file :
Tito_Scwrl_3O6T.pdb
: