Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKKVIVALGVLAFANVLMATDVKALVKGCAACHGVKFEKKALGKSKIVNMMSEKEIEEDLMAFKSGAN---------KNPVMTAQAKKLSDEDIKALAKYIPTLK----------------------------------------------------------------------------------------------------- |
1ETP Chain:A ((1-190)) | ---------------AGDAEAGQGKVAVCGACHGVDGNSPAPNFPKLAGQ-GERYLLKQLQDIKAGSTPGAPEGVGRKVLEMTGMLDPLSDQDLEDIAAYFSSQKGSVGYADPALAKQGEKLFRGGKLDQGMPACTGCHAPNGVGNDLAGFPKLGGQHAAYTAKQLTDFREGNRTNDGDTMIMRGVAAKLSNKDIEALSSYIQGLH |
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General information:
TITO was launched using:
| RESULT:
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Template: 1ETP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -21313 for 569 contacts (-37.5/contact) +
2D Compatibility (PS) -8261 + (NN) -355 + (LL) 1988
1D Compatibility (HY) -800 + (ID) 1200
Total energy: -29941.0 ( -52.62 by residue)
QMean score : 0.402
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